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|
Gene ID
|
Annotation
a
|
RPKM
|
Fold change
b
straw/willow
|
p-
value
straw/willow
|
|---|
|
ATCC 1015
| |
Glucose 48 h
|
Straw 24 h
|
Glucose 48 h
|
Willow 24 h
|
|---|
|
TID_43785
|
Feruloyl esterase
|
0.4
|
325.9
|
0.0
|
3.1
|
52.6
|
<0.01
|
|
TID_182100
|
Has domain(s) with predicted hydrolase activity
|
0.1
|
16.8
|
0.0
|
0.3
|
28.4
|
<0.01
|
|
TID_51662
|
faeA - Feruloyl esterase
|
0.4
|
396.3
|
0.0
|
13.0
|
13.9
|
<0.01
|
|
TID_47677
|
Putative xylan beta-xylosidase
|
0.2
|
76.0
|
0.1
|
9.4
|
3.7
|
<0.01
|
|
TID_55136
|
axhA, 1,4-beta-D-arabinoxylan arabinofuranohydrolase
|
1.7
|
904.6
|
0.9
|
116.3
|
3.4
|
0.15
|
|
TID_211544
|
axeA, Acetyl xylan esterase
|
0.7
|
562.4
|
0.6
|
161.5
|
1.7
|
0.83
|
|
TID_51478
|
faeB - Feruloyl esterase
|
0.3
|
1.9
|
0.5
|
0.5
|
1.6
|
0.64
|
|
TID_205580
|
Endoglucanase A
|
0.1
|
73.7
|
0.2
|
120.6
|
0.3
|
<0.05
|
|
TID_209376
|
Heat- and alkaline-stable endoglucanase
|
0.1
|
113.6
|
0.5
|
210.1
|
0.3
|
<0.01
|
-
aThe annotations here are for the A. niger CBS513.88 strain from the AspGD database [44].
-
bThe fold changes were calculated by the DESeq statistical analysis package using the normalised read counts.
